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b52fc70d1a
* gh-112529: Implement GC for free-threaded builds This implements a mark and sweep GC for the free-threaded builds of CPython. The implementation relies on mimalloc to find GC tracked objects (i.e., "containers").
695 lines
24 KiB
Python
695 lines
24 KiB
Python
"""Functions that read and write gzipped files.
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The user of the file doesn't have to worry about the compression,
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but random access is not allowed."""
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# based on Andrew Kuchling's minigzip.py distributed with the zlib module
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import struct, sys, time, os
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import zlib
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import builtins
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import io
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import _compression
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__all__ = ["BadGzipFile", "GzipFile", "open", "compress", "decompress"]
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FTEXT, FHCRC, FEXTRA, FNAME, FCOMMENT = 1, 2, 4, 8, 16
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READ, WRITE = 1, 2
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_COMPRESS_LEVEL_FAST = 1
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_COMPRESS_LEVEL_TRADEOFF = 6
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_COMPRESS_LEVEL_BEST = 9
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READ_BUFFER_SIZE = 128 * 1024
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_WRITE_BUFFER_SIZE = 4 * io.DEFAULT_BUFFER_SIZE
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def open(filename, mode="rb", compresslevel=_COMPRESS_LEVEL_BEST,
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encoding=None, errors=None, newline=None):
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"""Open a gzip-compressed file in binary or text mode.
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The filename argument can be an actual filename (a str or bytes object), or
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an existing file object to read from or write to.
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The mode argument can be "r", "rb", "w", "wb", "x", "xb", "a" or "ab" for
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binary mode, or "rt", "wt", "xt" or "at" for text mode. The default mode is
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"rb", and the default compresslevel is 9.
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For binary mode, this function is equivalent to the GzipFile constructor:
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GzipFile(filename, mode, compresslevel). In this case, the encoding, errors
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and newline arguments must not be provided.
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For text mode, a GzipFile object is created, and wrapped in an
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io.TextIOWrapper instance with the specified encoding, error handling
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behavior, and line ending(s).
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"""
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if "t" in mode:
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if "b" in mode:
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raise ValueError("Invalid mode: %r" % (mode,))
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else:
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if encoding is not None:
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raise ValueError("Argument 'encoding' not supported in binary mode")
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if errors is not None:
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raise ValueError("Argument 'errors' not supported in binary mode")
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if newline is not None:
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raise ValueError("Argument 'newline' not supported in binary mode")
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gz_mode = mode.replace("t", "")
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if isinstance(filename, (str, bytes, os.PathLike)):
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binary_file = GzipFile(filename, gz_mode, compresslevel)
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elif hasattr(filename, "read") or hasattr(filename, "write"):
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binary_file = GzipFile(None, gz_mode, compresslevel, filename)
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else:
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raise TypeError("filename must be a str or bytes object, or a file")
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if "t" in mode:
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encoding = io.text_encoding(encoding)
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return io.TextIOWrapper(binary_file, encoding, errors, newline)
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else:
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return binary_file
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def write32u(output, value):
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# The L format writes the bit pattern correctly whether signed
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# or unsigned.
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output.write(struct.pack("<L", value))
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class _PaddedFile:
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"""Minimal read-only file object that prepends a string to the contents
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of an actual file. Shouldn't be used outside of gzip.py, as it lacks
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essential functionality."""
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def __init__(self, f, prepend=b''):
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self._buffer = prepend
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self._length = len(prepend)
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self.file = f
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self._read = 0
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def read(self, size):
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if self._read is None:
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return self.file.read(size)
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if self._read + size <= self._length:
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read = self._read
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self._read += size
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return self._buffer[read:self._read]
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else:
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read = self._read
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self._read = None
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return self._buffer[read:] + \
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self.file.read(size-self._length+read)
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def prepend(self, prepend=b''):
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if self._read is None:
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self._buffer = prepend
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else: # Assume data was read since the last prepend() call
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self._read -= len(prepend)
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return
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self._length = len(self._buffer)
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self._read = 0
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def seek(self, off):
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self._read = None
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self._buffer = None
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return self.file.seek(off)
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def seekable(self):
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return True # Allows fast-forwarding even in unseekable streams
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class BadGzipFile(OSError):
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"""Exception raised in some cases for invalid gzip files."""
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class _WriteBufferStream(io.RawIOBase):
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"""Minimal object to pass WriteBuffer flushes into GzipFile"""
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def __init__(self, gzip_file):
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self.gzip_file = gzip_file
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def write(self, data):
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return self.gzip_file._write_raw(data)
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def seekable(self):
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return False
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def writable(self):
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return True
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class GzipFile(_compression.BaseStream):
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"""The GzipFile class simulates most of the methods of a file object with
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the exception of the truncate() method.
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This class only supports opening files in binary mode. If you need to open a
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compressed file in text mode, use the gzip.open() function.
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"""
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# Overridden with internal file object to be closed, if only a filename
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# is passed in
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myfileobj = None
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def __init__(self, filename=None, mode=None,
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compresslevel=_COMPRESS_LEVEL_BEST, fileobj=None, mtime=None):
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"""Constructor for the GzipFile class.
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At least one of fileobj and filename must be given a
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non-trivial value.
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The new class instance is based on fileobj, which can be a regular
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file, an io.BytesIO object, or any other object which simulates a file.
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It defaults to None, in which case filename is opened to provide
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a file object.
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When fileobj is not None, the filename argument is only used to be
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included in the gzip file header, which may include the original
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filename of the uncompressed file. It defaults to the filename of
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fileobj, if discernible; otherwise, it defaults to the empty string,
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and in this case the original filename is not included in the header.
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The mode argument can be any of 'r', 'rb', 'a', 'ab', 'w', 'wb', 'x', or
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'xb' depending on whether the file will be read or written. The default
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is the mode of fileobj if discernible; otherwise, the default is 'rb'.
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A mode of 'r' is equivalent to one of 'rb', and similarly for 'w' and
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'wb', 'a' and 'ab', and 'x' and 'xb'.
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The compresslevel argument is an integer from 0 to 9 controlling the
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level of compression; 1 is fastest and produces the least compression,
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and 9 is slowest and produces the most compression. 0 is no compression
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at all. The default is 9.
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The mtime argument is an optional numeric timestamp to be written
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to the last modification time field in the stream when compressing.
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If omitted or None, the current time is used.
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"""
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if mode and ('t' in mode or 'U' in mode):
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raise ValueError("Invalid mode: {!r}".format(mode))
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if mode and 'b' not in mode:
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mode += 'b'
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if fileobj is None:
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fileobj = self.myfileobj = builtins.open(filename, mode or 'rb')
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if filename is None:
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filename = getattr(fileobj, 'name', '')
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if not isinstance(filename, (str, bytes)):
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filename = ''
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else:
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filename = os.fspath(filename)
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origmode = mode
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if mode is None:
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mode = getattr(fileobj, 'mode', 'rb')
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if mode.startswith('r'):
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self.mode = READ
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raw = _GzipReader(fileobj)
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self._buffer = io.BufferedReader(raw)
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self.name = filename
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elif mode.startswith(('w', 'a', 'x')):
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if origmode is None:
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import warnings
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warnings.warn(
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"GzipFile was opened for writing, but this will "
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"change in future Python releases. "
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"Specify the mode argument for opening it for writing.",
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FutureWarning, 2)
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self.mode = WRITE
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self._init_write(filename)
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self.compress = zlib.compressobj(compresslevel,
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zlib.DEFLATED,
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-zlib.MAX_WBITS,
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zlib.DEF_MEM_LEVEL,
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0)
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self._write_mtime = mtime
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self._buffer_size = _WRITE_BUFFER_SIZE
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self._buffer = io.BufferedWriter(_WriteBufferStream(self),
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buffer_size=self._buffer_size)
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else:
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raise ValueError("Invalid mode: {!r}".format(mode))
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self.fileobj = fileobj
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if self.mode == WRITE:
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self._write_gzip_header(compresslevel)
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@property
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def mtime(self):
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"""Last modification time read from stream, or None"""
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return self._buffer.raw._last_mtime
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def __repr__(self):
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s = repr(self.fileobj)
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return '<gzip ' + s[1:-1] + ' ' + hex(id(self)) + '>'
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def _init_write(self, filename):
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self.name = filename
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self.crc = zlib.crc32(b"")
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self.size = 0
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self.writebuf = []
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self.bufsize = 0
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self.offset = 0 # Current file offset for seek(), tell(), etc
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def tell(self):
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self._check_not_closed()
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self._buffer.flush()
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return super().tell()
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def _write_gzip_header(self, compresslevel):
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self.fileobj.write(b'\037\213') # magic header
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self.fileobj.write(b'\010') # compression method
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try:
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# RFC 1952 requires the FNAME field to be Latin-1. Do not
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# include filenames that cannot be represented that way.
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fname = os.path.basename(self.name)
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if not isinstance(fname, bytes):
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fname = fname.encode('latin-1')
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if fname.endswith(b'.gz'):
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fname = fname[:-3]
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except UnicodeEncodeError:
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fname = b''
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flags = 0
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if fname:
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flags = FNAME
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self.fileobj.write(chr(flags).encode('latin-1'))
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mtime = self._write_mtime
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if mtime is None:
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mtime = time.time()
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write32u(self.fileobj, int(mtime))
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if compresslevel == _COMPRESS_LEVEL_BEST:
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xfl = b'\002'
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elif compresslevel == _COMPRESS_LEVEL_FAST:
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xfl = b'\004'
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else:
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xfl = b'\000'
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self.fileobj.write(xfl)
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self.fileobj.write(b'\377')
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if fname:
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self.fileobj.write(fname + b'\000')
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def write(self,data):
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self._check_not_closed()
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if self.mode != WRITE:
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import errno
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raise OSError(errno.EBADF, "write() on read-only GzipFile object")
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if self.fileobj is None:
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raise ValueError("write() on closed GzipFile object")
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return self._buffer.write(data)
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def _write_raw(self, data):
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# Called by our self._buffer underlying WriteBufferStream.
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if isinstance(data, (bytes, bytearray)):
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length = len(data)
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else:
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# accept any data that supports the buffer protocol
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data = memoryview(data)
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length = data.nbytes
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if length > 0:
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self.fileobj.write(self.compress.compress(data))
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self.size += length
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self.crc = zlib.crc32(data, self.crc)
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self.offset += length
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return length
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def read(self, size=-1):
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self._check_not_closed()
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if self.mode != READ:
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import errno
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raise OSError(errno.EBADF, "read() on write-only GzipFile object")
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return self._buffer.read(size)
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def read1(self, size=-1):
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"""Implements BufferedIOBase.read1()
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Reads up to a buffer's worth of data if size is negative."""
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self._check_not_closed()
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if self.mode != READ:
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import errno
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raise OSError(errno.EBADF, "read1() on write-only GzipFile object")
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if size < 0:
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size = io.DEFAULT_BUFFER_SIZE
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return self._buffer.read1(size)
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def peek(self, n):
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self._check_not_closed()
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if self.mode != READ:
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import errno
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raise OSError(errno.EBADF, "peek() on write-only GzipFile object")
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return self._buffer.peek(n)
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@property
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def closed(self):
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return self.fileobj is None
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def close(self):
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fileobj = self.fileobj
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if fileobj is None or self._buffer.closed:
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return
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try:
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if self.mode == WRITE:
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self._buffer.flush()
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fileobj.write(self.compress.flush())
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write32u(fileobj, self.crc)
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# self.size may exceed 2 GiB, or even 4 GiB
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write32u(fileobj, self.size & 0xffffffff)
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elif self.mode == READ:
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self._buffer.close()
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finally:
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self.fileobj = None
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myfileobj = self.myfileobj
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if myfileobj:
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self.myfileobj = None
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myfileobj.close()
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def flush(self,zlib_mode=zlib.Z_SYNC_FLUSH):
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self._check_not_closed()
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if self.mode == WRITE:
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self._buffer.flush()
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# Ensure the compressor's buffer is flushed
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self.fileobj.write(self.compress.flush(zlib_mode))
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self.fileobj.flush()
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def fileno(self):
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"""Invoke the underlying file object's fileno() method.
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This will raise AttributeError if the underlying file object
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doesn't support fileno().
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"""
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return self.fileobj.fileno()
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def rewind(self):
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'''Return the uncompressed stream file position indicator to the
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beginning of the file'''
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if self.mode != READ:
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raise OSError("Can't rewind in write mode")
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self._buffer.seek(0)
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def readable(self):
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return self.mode == READ
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def writable(self):
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return self.mode == WRITE
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def seekable(self):
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return True
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def seek(self, offset, whence=io.SEEK_SET):
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if self.mode == WRITE:
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self._check_not_closed()
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# Flush buffer to ensure validity of self.offset
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self._buffer.flush()
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if whence != io.SEEK_SET:
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if whence == io.SEEK_CUR:
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offset = self.offset + offset
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else:
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raise ValueError('Seek from end not supported')
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if offset < self.offset:
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raise OSError('Negative seek in write mode')
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count = offset - self.offset
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chunk = b'\0' * self._buffer_size
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for i in range(count // self._buffer_size):
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self.write(chunk)
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self.write(b'\0' * (count % self._buffer_size))
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elif self.mode == READ:
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self._check_not_closed()
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return self._buffer.seek(offset, whence)
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return self.offset
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def readline(self, size=-1):
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self._check_not_closed()
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return self._buffer.readline(size)
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def _read_exact(fp, n):
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'''Read exactly *n* bytes from `fp`
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This method is required because fp may be unbuffered,
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i.e. return short reads.
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'''
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data = fp.read(n)
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while len(data) < n:
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b = fp.read(n - len(data))
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if not b:
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raise EOFError("Compressed file ended before the "
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"end-of-stream marker was reached")
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data += b
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return data
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def _read_gzip_header(fp):
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'''Read a gzip header from `fp` and progress to the end of the header.
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Returns last mtime if header was present or None otherwise.
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'''
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magic = fp.read(2)
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if magic == b'':
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return None
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if magic != b'\037\213':
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raise BadGzipFile('Not a gzipped file (%r)' % magic)
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(method, flag, last_mtime) = struct.unpack("<BBIxx", _read_exact(fp, 8))
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if method != 8:
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raise BadGzipFile('Unknown compression method')
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if flag & FEXTRA:
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# Read & discard the extra field, if present
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extra_len, = struct.unpack("<H", _read_exact(fp, 2))
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_read_exact(fp, extra_len)
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if flag & FNAME:
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# Read and discard a null-terminated string containing the filename
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while True:
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s = fp.read(1)
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if not s or s==b'\000':
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break
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if flag & FCOMMENT:
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# Read and discard a null-terminated string containing a comment
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while True:
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s = fp.read(1)
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if not s or s==b'\000':
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break
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if flag & FHCRC:
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_read_exact(fp, 2) # Read & discard the 16-bit header CRC
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return last_mtime
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class _GzipReader(_compression.DecompressReader):
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def __init__(self, fp):
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super().__init__(_PaddedFile(fp), zlib._ZlibDecompressor,
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wbits=-zlib.MAX_WBITS)
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# Set flag indicating start of a new member
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self._new_member = True
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self._last_mtime = None
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def _init_read(self):
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self._crc = zlib.crc32(b"")
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self._stream_size = 0 # Decompressed size of unconcatenated stream
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def _read_gzip_header(self):
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last_mtime = _read_gzip_header(self._fp)
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if last_mtime is None:
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return False
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self._last_mtime = last_mtime
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return True
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def read(self, size=-1):
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if size < 0:
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return self.readall()
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# size=0 is special because decompress(max_length=0) is not supported
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if not size:
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return b""
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# For certain input data, a single
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# call to decompress() may not return
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# any data. In this case, retry until we get some data or reach EOF.
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while True:
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if self._decompressor.eof:
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# Ending case: we've come to the end of a member in the file,
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# so finish up this member, and read a new gzip header.
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# Check the CRC and file size, and set the flag so we read
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# a new member
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self._read_eof()
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self._new_member = True
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|
self._decompressor = self._decomp_factory(
|
|
**self._decomp_args)
|
|
|
|
if self._new_member:
|
|
# If the _new_member flag is set, we have to
|
|
# jump to the next member, if there is one.
|
|
self._init_read()
|
|
if not self._read_gzip_header():
|
|
self._size = self._pos
|
|
return b""
|
|
self._new_member = False
|
|
|
|
# Read a chunk of data from the file
|
|
if self._decompressor.needs_input:
|
|
buf = self._fp.read(READ_BUFFER_SIZE)
|
|
uncompress = self._decompressor.decompress(buf, size)
|
|
else:
|
|
uncompress = self._decompressor.decompress(b"", size)
|
|
|
|
if self._decompressor.unused_data != b"":
|
|
# Prepend the already read bytes to the fileobj so they can
|
|
# be seen by _read_eof() and _read_gzip_header()
|
|
self._fp.prepend(self._decompressor.unused_data)
|
|
|
|
if uncompress != b"":
|
|
break
|
|
if buf == b"":
|
|
raise EOFError("Compressed file ended before the "
|
|
"end-of-stream marker was reached")
|
|
|
|
self._crc = zlib.crc32(uncompress, self._crc)
|
|
self._stream_size += len(uncompress)
|
|
self._pos += len(uncompress)
|
|
return uncompress
|
|
|
|
def _read_eof(self):
|
|
# We've read to the end of the file
|
|
# We check that the computed CRC and size of the
|
|
# uncompressed data matches the stored values. Note that the size
|
|
# stored is the true file size mod 2**32.
|
|
crc32, isize = struct.unpack("<II", _read_exact(self._fp, 8))
|
|
if crc32 != self._crc:
|
|
raise BadGzipFile("CRC check failed %s != %s" % (hex(crc32),
|
|
hex(self._crc)))
|
|
elif isize != (self._stream_size & 0xffffffff):
|
|
raise BadGzipFile("Incorrect length of data produced")
|
|
|
|
# Gzip files can be padded with zeroes and still have archives.
|
|
# Consume all zero bytes and set the file position to the first
|
|
# non-zero byte. See http://www.gzip.org/#faq8
|
|
c = b"\x00"
|
|
while c == b"\x00":
|
|
c = self._fp.read(1)
|
|
if c:
|
|
self._fp.prepend(c)
|
|
|
|
def _rewind(self):
|
|
super()._rewind()
|
|
self._new_member = True
|
|
|
|
|
|
def _create_simple_gzip_header(compresslevel: int,
|
|
mtime = None) -> bytes:
|
|
"""
|
|
Write a simple gzip header with no extra fields.
|
|
:param compresslevel: Compresslevel used to determine the xfl bytes.
|
|
:param mtime: The mtime (must support conversion to a 32-bit integer).
|
|
:return: A bytes object representing the gzip header.
|
|
"""
|
|
if mtime is None:
|
|
mtime = time.time()
|
|
if compresslevel == _COMPRESS_LEVEL_BEST:
|
|
xfl = 2
|
|
elif compresslevel == _COMPRESS_LEVEL_FAST:
|
|
xfl = 4
|
|
else:
|
|
xfl = 0
|
|
# Pack ID1 and ID2 magic bytes, method (8=deflate), header flags (no extra
|
|
# fields added to header), mtime, xfl and os (255 for unknown OS).
|
|
return struct.pack("<BBBBLBB", 0x1f, 0x8b, 8, 0, int(mtime), xfl, 255)
|
|
|
|
|
|
def compress(data, compresslevel=_COMPRESS_LEVEL_BEST, *, mtime=None):
|
|
"""Compress data in one shot and return the compressed string.
|
|
|
|
compresslevel sets the compression level in range of 0-9.
|
|
mtime can be used to set the modification time. The modification time is
|
|
set to the current time by default.
|
|
"""
|
|
if mtime == 0:
|
|
# Use zlib as it creates the header with 0 mtime by default.
|
|
# This is faster and with less overhead.
|
|
return zlib.compress(data, level=compresslevel, wbits=31)
|
|
header = _create_simple_gzip_header(compresslevel, mtime)
|
|
trailer = struct.pack("<LL", zlib.crc32(data), (len(data) & 0xffffffff))
|
|
# Wbits=-15 creates a raw deflate block.
|
|
return (header + zlib.compress(data, level=compresslevel, wbits=-15) +
|
|
trailer)
|
|
|
|
|
|
def decompress(data):
|
|
"""Decompress a gzip compressed string in one shot.
|
|
Return the decompressed string.
|
|
"""
|
|
decompressed_members = []
|
|
while True:
|
|
fp = io.BytesIO(data)
|
|
if _read_gzip_header(fp) is None:
|
|
return b"".join(decompressed_members)
|
|
# Use a zlib raw deflate compressor
|
|
do = zlib.decompressobj(wbits=-zlib.MAX_WBITS)
|
|
# Read all the data except the header
|
|
decompressed = do.decompress(data[fp.tell():])
|
|
if not do.eof or len(do.unused_data) < 8:
|
|
raise EOFError("Compressed file ended before the end-of-stream "
|
|
"marker was reached")
|
|
crc, length = struct.unpack("<II", do.unused_data[:8])
|
|
if crc != zlib.crc32(decompressed):
|
|
raise BadGzipFile("CRC check failed")
|
|
if length != (len(decompressed) & 0xffffffff):
|
|
raise BadGzipFile("Incorrect length of data produced")
|
|
decompressed_members.append(decompressed)
|
|
data = do.unused_data[8:].lstrip(b"\x00")
|
|
|
|
|
|
def main():
|
|
from argparse import ArgumentParser
|
|
parser = ArgumentParser(description=
|
|
"A simple command line interface for the gzip module: act like gzip, "
|
|
"but do not delete the input file.")
|
|
group = parser.add_mutually_exclusive_group()
|
|
group.add_argument('--fast', action='store_true', help='compress faster')
|
|
group.add_argument('--best', action='store_true', help='compress better')
|
|
group.add_argument("-d", "--decompress", action="store_true",
|
|
help="act like gunzip instead of gzip")
|
|
|
|
parser.add_argument("args", nargs="*", default=["-"], metavar='file')
|
|
args = parser.parse_args()
|
|
|
|
compresslevel = _COMPRESS_LEVEL_TRADEOFF
|
|
if args.fast:
|
|
compresslevel = _COMPRESS_LEVEL_FAST
|
|
elif args.best:
|
|
compresslevel = _COMPRESS_LEVEL_BEST
|
|
|
|
for arg in args.args:
|
|
if args.decompress:
|
|
if arg == "-":
|
|
f = GzipFile(filename="", mode="rb", fileobj=sys.stdin.buffer)
|
|
g = sys.stdout.buffer
|
|
else:
|
|
if arg[-3:] != ".gz":
|
|
sys.exit(f"filename doesn't end in .gz: {arg!r}")
|
|
f = open(arg, "rb")
|
|
g = builtins.open(arg[:-3], "wb")
|
|
else:
|
|
if arg == "-":
|
|
f = sys.stdin.buffer
|
|
g = GzipFile(filename="", mode="wb", fileobj=sys.stdout.buffer,
|
|
compresslevel=compresslevel)
|
|
else:
|
|
f = builtins.open(arg, "rb")
|
|
g = open(arg + ".gz", "wb")
|
|
while True:
|
|
chunk = f.read(READ_BUFFER_SIZE)
|
|
if not chunk:
|
|
break
|
|
g.write(chunk)
|
|
if g is not sys.stdout.buffer:
|
|
g.close()
|
|
if f is not sys.stdin.buffer:
|
|
f.close()
|
|
|
|
if __name__ == '__main__':
|
|
main()
|